7VORTEX: Systems Thinking Powered by Graph Technology
By Bryce Merkl Sasaki
October 10, 2017|
Reading time: 5 minutes
The success of many enterprises greatly depends on their ability to gather useful information and process it in a timely manner. Automation is essential and so is presentation, giving tangible feedback, to decision makers. This is where technology reaches out… Read more →
Keywords: biology • Connected Data • graph algorithms • graph technology • graph visualization • GraphAware • graphconnect • natural language processing • nlp • PageRank
Integrating All of Biology into a Public Neo4j Database
By Rachel Howard
June 20, 2017|
Reading time: 7 minutes
Editor’s Note: This presentation was given by Daniel Himmelstein at GraphConnect San Francisco in October 2016. Summary Himmelstein started his PhD research with the question: How do you teach a computer biology? He found the answer in a heterogenous network… Read more →
Keywords: biology • digitalocean • docker • drug repurposing • graphconnect • heterogeneous network • hetnet • machine learning • property graph • python
The 5-Minute Interview: Daniel Himmelstein, Postdoctoral Fellow at University of Pennsylvania
By Rachel Howard
January 6, 2017|
Reading time: 3 minutes
“This is a really advanced graph algorithm and Cypher nailed it,” said Daniel Himmelstein, a Postdoctoral Fellow at the University of Pennsylvania. Before using Neo4j, it took as many as 1,000 lines of code to write the main query for… Read more →
Keywords: 5-minute interview • Bioinformatics • biology • bolt • cypher • Graph Algorithm • graphconnect • Neo4j Community • python • r
REST::Neo4p – A Perl “OGM”
By Neo4j Staff
October 21, 2012|
Reading time: 7 minutes
REST::Neo4p – A Perl “OGM” This is a guest post by Mark A. Jensen, a DC area bioinformatics scientist. Thanks a lot Mark for writing the impressive Neo4j Perl library and taking the time to documenting it thoroughly. You might… Read more →
Keywords: biology • biotech • driver • graphdb • perl • rdbms • rest • REST API
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